SNP Detail For rs1148259
1.Mapping Information
Human SNP ID rs1148259
Human chromosome chr10
Human SNP position 37219522
Pig chromosome chr17
Pig SNP position 14357122
2.Annotation Information
PubMed ID19043545
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19043545
StudyGenetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum.
Disease/TraitMetabolite levels
Initial sample284 European ancestry male individuals
Replication sampleNA
Region10p11.21
Chromosome idchr10
Chromosome position37219522
Reported geneANKRD30A
Mapped geneANKRD30A
Upstream gene id
Downstream gene id
SNP gene ids91074
Upstream gene distance
Downstream gene distance
SNP risk allelers1148259-?
SNPsrs1148259
Merged0
SNP id current1148259
Contextsynonymous_variant
Intergenic0
Allele frequency0.42
P value0.000000003
Pvalue mlog8.52287874528033
P value text(SM)
Or beta
%95 Ci
PlatformAffymetrix [187454]
CNVN
Mapped traitsphingolipid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004622
Study accessionGCST000274