SNP Detail For rs11454281
1.Mapping Information
Human SNP ID rs11454281
Human chromosome chr13
Human SNP position 64920645
Pig chromosome chr11
Pig SNP position 40071613
2.Annotation Information
PubMed ID25760438
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25760438
StudyFirst genome-wide association study in an Australian aboriginal population provides insights into genetic risk factors for body mass index and type 2 diabetes.
Disease/TraitType 2 diabetes
Initial sample89 Martu Australian Aboriginal ancestry cases, 302 Martu Australian Aboriginal ancestry controls
Replication sampleNA
Region13q21.31
Chromosome idchr13
Chromosome position64920645
Reported geneintergenic
Mapped geneLOC105370240 - LGMNP1
Upstream gene id105370240
Downstream gene id122199
SNP gene ids
Upstream gene distance122911
Downstream gene distance36911
SNP risk allelers11454281-?
SNPsrs11454281
Merged0
SNP id current11454281
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.6
%95 Ci[0.33-0.87] unit increase
PlatformIllumina [1075436] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST002806