Human SNP ID | rs114444506 |
---|---|
Human chromosome | chr11 |
Human SNP position | 26325284 |
Pig chromosome | chr2 |
Pig SNP position | 36518705 |
PubMed ID | 25344690 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25344690 |
Study | Common variants associated with general and MMR vaccine-related febrile seizures. |
Disease/Trait | Febrile seizures |
Initial sample | 929 European ancestry MMR vaccine-related febrile seizures cases, 1,070 European ancestry MMR vaccine-unrelated febrile seizures cases, 4,118 European ancestry controls |
Replication sample | Up to 408 European ancestry MMR vaccine-related febrile seizures cases, Up to 1,034 European ancestry MMR vaccine-unrelated febrile seizures cases, Up to 1,645 European ancestry controls |
Region | 11p14.2 |
Chromosome id | chr11 |
Chromosome position | 26325284 |
Reported gene | ANO3 |
Mapped gene | ANO3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 63982 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs114444506-C |
SNPs | rs114444506 |
Merged | 0 |
SNP id current | 114444506 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.028 |
P value | 4E-20 |
Pvalue mlog | 19.397940008672 |
P value text | (Overall) |
Or beta | 2.09 |
%95 Ci | [1.79-2.44] |
Platform | Illumina [up to 8129553] (imputed) |
CNV | N |
Mapped trait | febrile seizures |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0002373 |
Study accession | GCST002672 |
PubMed ID | 25344690 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25344690 |
Study | Common variants associated with general and MMR vaccine-related febrile seizures. |
Disease/Trait | Febrile seizures (MMR vaccine-related) |
Initial sample | 929 European ancestry cases, 4,118 European ancestry controls |
Replication sample | Up to 408 European ancestry cases, Up to 1,645 European ancestry controls |
Region | 11p14.2 |
Chromosome id | chr11 |
Chromosome position | 26325284 |
Reported gene | ANO3 |
Mapped gene | ANO3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 63982 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs114444506-C |
SNPs | rs114444506 |
Merged | 0 |
SNP id current | 114444506 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.028 |
P value | 0.000000000002 |
Pvalue mlog | 11.698970004336 |
P value text | |
Or beta | 2.11 |
%95 Ci | [1.72-2.60] |
Platform | Illumina [8129524] (imputed) |
CNV | N |
Mapped trait | MMR-related febrile seizures |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006519 |
Study accession | GCST002674 |
PubMed ID | 25344690 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25344690 |
Study | Common variants associated with general and MMR vaccine-related febrile seizures. |
Disease/Trait | Febrile seizures (MMR vaccine-unrelated) |
Initial sample | 1,070 European ancestry cases, 4,118 European ancestry controls |
Replication sample | Up to 1,034 European ancestry cases, Up to 1,645 European ancestry controls |
Region | 11p14.2 |
Chromosome id | chr11 |
Chromosome position | 26325284 |
Reported gene | ANO3 |
Mapped gene | ANO3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 63982 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs114444506-C |
SNPs | rs114444506 |
Merged | 0 |
SNP id current | 114444506 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.028 |
P value | 0.00000000000005 |
Pvalue mlog | 13.3010299956639 |
P value text | |
Or beta | 2.03 |
%95 Ci | [1.69-2.45] |
Platform | Illumina [8129384] (imputed) |
CNV | N |
Mapped trait | febrile seizures |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0002373 |
Study accession | GCST002673 |