SNP Detail For rs114162361
1.Mapping Information
Human SNP ID rs114162361
Human chromosome chr1
Human SNP position 174606504
Pig chromosome chr9
Pig SNP position 128450886
2.Annotation Information
PubMed ID26252872
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26252872
StudyVariations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level.
Disease/TraitCerebrospinal fluid t-tau:AB1-42 ratio
Initial sampleup to 189 European and other ancestry early mild cognitive impairment cases, up to 251 European and other ancestry late mild cognitive impairment cases, up to 121 European and other ancestry Alzheimer__s disease cases, up to 215 European and other ance
Replication sampleup to 3 European and other ancestry significant memory concern cases, up to 57 European and other ancestry early mild cognitive impairment cases, up to 61 European and other ancestry late mild cognitive impairment cases, up to 62 European and other an
Region1q25.1
Chromosome idchr1
Chromosome position174606504
Reported geneRABGAP1L
Mapped geneRABGAP1L
Upstream gene id
Downstream gene id
SNP gene ids9910
Upstream gene distance
Downstream gene distance
SNP risk allelers114162361-C
SNPsrs114162361
Merged
SNP id current114162361
Contextintron_variant
Intergenic0
Allele frequency0.01
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta0.6189
%95 Ci[NR] unit decrease
PlatformIllumina [~ 9000000] (imputed)
CNVN
Mapped traitt-tau:beta-amyloid 1-42 ratio measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007708
Study accessionGCST003079