SNP Detail For rs1140522
1.Mapping Information
Human SNP ID rs1140522
Human chromosome chr8
Human SNP position 143924001
Pig chromosome chr7
Pig SNP position 5014613
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region8q24.3
Chromosome idchr8
Chromosome position143924001
Reported genePLEC
Mapped genePLEC
Upstream gene id
Downstream gene id
SNP gene ids5339
Upstream gene distance
Downstream gene distance
SNP risk allelers1140522-T
SNPsrs1140522
Merged0
SNP id current1140522
Contextsynonymous_variant
Intergenic0
Allele frequency0.375
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.044
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262