SNP Detail For rs113936974
1.Mapping Information
Human SNP ID rs113936974
Human chromosome chr17
Human SNP position 73890491
Pig chromosome chr12
Pig SNP position 7155612
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region17q25.1
Chromosome idchr17
Chromosome position73890491
Reported geneIntergenic
Mapped geneLINC00469 - LOC107985081
Upstream gene id283982
Downstream gene id107985081
SNP gene ids
Upstream gene distance61954
Downstream gene distance21633
SNP risk allelers113936974-T
SNPsrs113936974
Merged0
SNP id current113936974
Contextdownstream_gene_variant
Intergenic1
Allele frequency1
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.409
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264