SNP Detail For rs1137
1.Mapping Information
Human SNP ID rs1137
Human chromosome chr2
Human SNP position 74712049
Pig chromosome chr3
Pig SNP position 71527018
2.Annotation Information
PubMed ID22685421
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22685421
StudyGenetic variants on chromosome 1q41 influence ocular axial length and high myopia.
Disease/TraitMyopia (pathological)
Initial sample2,789 Chinese ancestry individuals, 2,155 Malay ancestry individuals
Replication sampleNA
Region2p13.1
Chromosome idchr2
Chromosome position74712049
Reported geneSEMA4F
Mapped geneLOC105374808 - LOC102724497
Upstream gene id105374808
Downstream gene id102724497
SNP gene ids
Upstream gene distance3102
Downstream gene distance3160
SNP risk allelers1137-C
SNPsrs1137
Merged0
SNP id current1137
Contextintergenic_variant
Intergenic1
Allele frequency0.16
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.12
%95 Ci[0.061-0.179] mm increase
PlatformIllumina [456634]
CNVN
Mapped traitpathological myopia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004207
Study accessionGCST001561