Human SNP ID | rs1137 |
---|---|
Human chromosome | chr2 |
Human SNP position | 74712049 |
Pig chromosome | chr3 |
Pig SNP position | 71527018 |
PubMed ID | 22685421 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22685421 |
Study | Genetic variants on chromosome 1q41 influence ocular axial length and high myopia. |
Disease/Trait | Myopia (pathological) |
Initial sample | 2,789 Chinese ancestry individuals, 2,155 Malay ancestry individuals |
Replication sample | NA |
Region | 2p13.1 |
Chromosome id | chr2 |
Chromosome position | 74712049 |
Reported gene | SEMA4F |
Mapped gene | LOC105374808 - LOC102724497 |
Upstream gene id | 105374808 |
Downstream gene id | 102724497 |
SNP gene ids | |
Upstream gene distance | 3102 |
Downstream gene distance | 3160 |
SNP risk allele | rs1137-C |
SNPs | rs1137 |
Merged | 0 |
SNP id current | 1137 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.16 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.12 |
%95 Ci | [0.061-0.179] mm increase |
Platform | Illumina [456634] |
CNV | N |
Mapped trait | pathological myopia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004207 |
Study accession | GCST001561 |