SNP Detail For rs113524839
1.Mapping Information
Human SNP ID rs113524839
Human chromosome chr5
Human SNP position 84788958
Pig chromosome chr2
Pig SNP position 95098908
2.Annotation Information
PubMed ID23419831
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23419831
StudyAPOE and BCHE as modulators of cerebral amyloid deposition: a florbetapir PET genome-wide association study.
Disease/TraitAlzheimer__s disease biomarkers
Initial sample555 European ancestry individuals
Replication sampleNA
Region5q14.3
Chromosome idchr5
Chromosome position84788958
Reported geneEDIL3
Mapped geneLOC105379060 - LOC100289244
Upstream gene id105379060
Downstream gene id100289244
SNP gene ids
Upstream gene distance183145
Downstream gene distance210660
SNP risk allelers113524839-T
SNPsrs113524839
Merged0
SNP id current113524839
Contextintergenic_variant
Intergenic1
Allele frequency0.11
P value0.0000008
Pvalue mlog6.09691001300805
P value text(Cortical Ab)
Or beta
%95 Ci
PlatformIllumina [6108668] (imputed)
CNVN
Mapped traitamyloid-beta measurement, Alzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005194, http://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001868