SNP Detail For rs113441626
1.Mapping Information
Human SNP ID rs113441626
Human chromosome chr15
Human SNP position 71814833
Pig chromosome chr1
Pig SNP position 187985837
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxypropylmercapturic acid levels in smokers
Initial sample362 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 438 European ancestry current smoker individuals, 449 Latino current smoker individuals, 704 Japanese ancestry current smoker individuals
Replication sampleNA
Region15q23
Chromosome idchr15
Chromosome position71814833
Reported geneNR
Mapped geneNR2E3
Upstream gene id
Downstream gene id
SNP gene ids10002
Upstream gene distance
Downstream gene distance
SNP risk allelers113441626-?
SNPsrs113441626
Merged
SNP id current113441626
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.00000008
Pvalue mlog7.09691001300805
P value text(Native Hawaiian)
Or beta1.3074
%95 Ci[NR] unit increase
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxypropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007014
Study accessionGCST002956