SNP Detail For rs113203253
1.Mapping Information
Human SNP ID rs113203253
Human chromosome chr17
Human SNP position 58270707
Pig chromosome chr12
Pig SNP position 36256105
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region17q22
Chromosome idchr17
Chromosome position58270707
Reported geneMPO
Mapped geneMPO
Upstream gene id
Downstream gene id
SNP gene ids4353
Upstream gene distance
Downstream gene distance
SNP risk allelers113203253-A
SNPsrs113203253
Merged0
SNP id current113203253
Contextsynonymous_variant
Intergenic0
Allele frequency0.984
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.115
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265