Human SNP ID | rs1131351 |
---|---|
Human chromosome | chr2 |
Human SNP position | 20202619 |
Pig chromosome | chr3 |
Pig SNP position | 125990647 |
PubMed ID | 25562672 |
---|---|
Journal | J Clin Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25562672 |
Study | Seasonality shows evidence for polygenic architecture and genetic correlation with schizophrenia and bipolar disorder. |
Disease/Trait | Seasonality |
Initial sample | 3,269 European ancestry individuals |
Replication sample | 887 Old order Amish individuals |
Region | 2p24.1 |
Chromosome id | chr2 |
Chromosome position | 20202619 |
Reported gene | SDC1 |
Mapped gene | SDC1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6382 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1131351-C |
SNPs | rs1131351 |
Merged | 0 |
SNP id current | 1131351 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.51 |
%95 Ci | [0.29-0.73] unit increase |
Platform | Affymetrix, Illumina [2354422] (imputed) |
CNV | N |
Mapped trait | seasonality measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006876 |
Study accession | GCST002719 |