SNP Detail For rs1131351
1.Mapping Information
Human SNP ID rs1131351
Human chromosome chr2
Human SNP position 20202619
Pig chromosome chr3
Pig SNP position 125990647
2.Annotation Information
PubMed ID25562672
JournalJ Clin Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25562672
StudySeasonality shows evidence for polygenic architecture and genetic correlation with schizophrenia and bipolar disorder.
Disease/TraitSeasonality
Initial sample3,269 European ancestry individuals
Replication sample887 Old order Amish individuals
Region2p24.1
Chromosome idchr2
Chromosome position20202619
Reported geneSDC1
Mapped geneSDC1
Upstream gene id
Downstream gene id
SNP gene ids6382
Upstream gene distance
Downstream gene distance
SNP risk allelers1131351-C
SNPsrs1131351
Merged0
SNP id current1131351
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.51
%95 Ci[0.29-0.73] unit increase
PlatformAffymetrix, Illumina [2354422] (imputed)
CNVN
Mapped traitseasonality measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006876
Study accessionGCST002719