SNP Detail For rs11264330
1.Mapping Information
Human SNP ID rs11264330
Human chromosome chr1
Human SNP position 155126429
Pig chromosome chr4
Pig SNP position 103456728
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1q22
Chromosome idchr1
Chromosome position155126429
Reported geneEFNA1
Mapped geneEFNA3 - EFNA1
Upstream gene id1944
Downstream gene id1942
SNP gene ids
Upstream gene distance38891
Downstream gene distance1444
SNP risk allelers11264330-A
SNPsrs11264330
Merged0
SNP id current11264330
Contextupstream_gene_variant
Intergenic1
Allele frequency0.06
P value0.000005
Pvalue mlog5.30102999566398
P value text(MCP1 )
Or beta0.04
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitCCL2 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004749
Study accessionGCST001762