Human SNP ID | rs11264330 |
---|---|
Human chromosome | chr1 |
Human SNP position | 155126429 |
Pig chromosome | chr4 |
Pig SNP position | 103456728 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 1q22 |
Chromosome id | chr1 |
Chromosome position | 155126429 |
Reported gene | EFNA1 |
Mapped gene | EFNA3 - EFNA1 |
Upstream gene id | 1944 |
Downstream gene id | 1942 |
SNP gene ids | |
Upstream gene distance | 38891 |
Downstream gene distance | 1444 |
SNP risk allele | rs11264330-A |
SNPs | rs11264330 |
Merged | 0 |
SNP id current | 11264330 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.06 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (MCP1 ) |
Or beta | 0.04 |
%95 Ci | [NR] pg/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | CCL2 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004749 |
Study accession | GCST001762 |