Human SNP ID | rs11249878 |
---|---|
Human chromosome | chr8 |
Human SNP position | 8692745 |
Pig chromosome | chr17 |
Pig SNP position | 166562 |
PubMed ID | 26451028 |
---|---|
Journal | Stroke |
Link | www.ncbi.nlm.nih.gov/pubmed/26451028 |
Study | White Matter Lesion Progression: Genome-Wide Search for Genetic Influences. |
Disease/Trait | White matter lesion progression |
Initial sample | 1,085 European ancestry elderly cases, 6,688 European ancestry elderly controls |
Replication sample | NA |
Region | 8p23.1 |
Chromosome id | chr8 |
Chromosome position | 8692745 |
Reported gene | CLDN23 |
Mapped gene | LOC105379225 - CLDN23 |
Upstream gene id | 105379225 |
Downstream gene id | 137075 |
SNP gene ids | |
Upstream gene distance | 5766 |
Downstream gene distance | 9411 |
SNP risk allele | rs11249878-C |
SNPs | rs11249878 |
Merged | |
SNP id current | 11249878 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.3 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.27 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [up to 2543887] (imputed) |
CNV | N |
Mapped trait | white matter lesion progression measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007746 |
Study accession | GCST003151 |