Human SNP ID | rs11248850 |
---|---|
Human chromosome | chr16 |
Human SNP position | 113599 |
Pig chromosome | chr3 |
Pig SNP position | 40914916 |
PubMed ID | 23222517 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23222517 |
Study | Seventy-five genetic loci influencing the human red blood cell. |
Disease/Trait | Red blood cell traits |
Initial sample | 62,553 European ancestry individuals, 9,308 South Asian ancestry individuals |
Replication sample | 63,506 European ancestry individuals |
Region | 16p13.3 |
Chromosome id | chr16 |
Chromosome position | 113599 |
Reported gene | NPRL3, KIF22 |
Mapped gene | NPRL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8131 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11248850-G |
SNPs | rs11248850 |
Merged | 0 |
SNP id current | 11248850 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.5 |
P value | 6E-23 |
Pvalue mlog | 22.2218487496163 |
P value text | (EA, MCH) |
Or beta | 0.007 |
%95 Ci | [-0.00084-0.01484] unit increase |
Platform | Affymetrix, Illumina, Perlegen [2711806] (imputed) |
CNV | N |
Mapped trait | mean corpuscular hemoglobin |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004527 |
Study accession | GCST001765 |