Human SNP ID | rs1124480 |
---|---|
Human chromosome | chr3 |
Human SNP position | 13816472 |
Pig chromosome | chr13 |
Pig SNP position | 78061856 |
PubMed ID | 23144326 |
---|---|
Journal | Am J Respir Crit Care Med |
Link | www.ncbi.nlm.nih.gov/pubmed/23144326 |
Study | Genome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease. |
Disease/Trait | Chronic obstructive pulmonary disease-related biomarkers |
Initial sample | Up to 1,951 European ancestry smokers |
Replication sample | NA |
Region | 3p25.1 |
Chromosome id | chr3 |
Chromosome position | 13816472 |
Reported gene | WNT7A |
Mapped gene | LINC00620 - WNT7A |
Upstream gene id | 285375 |
Downstream gene id | 7476 |
SNP gene ids | |
Upstream gene distance | 69837 |
Downstream gene distance | 1745 |
SNP risk allele | rs1124480-C |
SNPs | rs1124480 |
Merged | 0 |
SNP id current | 1124480 |
Context | 3_prime_UTR_variant |
Intergenic | 1 |
Allele frequency | 0.46 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (IL6) |
Or beta | |
%95 Ci | |
Platform | Illumina [588352] |
CNV | N |
Mapped trait | interleukin-6 measurement, chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004810, http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST001737 |