SNP Detail For rs1124480
1.Mapping Information
Human SNP ID rs1124480
Human chromosome chr3
Human SNP position 13816472
Pig chromosome chr13
Pig SNP position 78061856
2.Annotation Information
PubMed ID23144326
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/23144326
StudyGenome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease.
Disease/TraitChronic obstructive pulmonary disease-related biomarkers
Initial sampleUp to 1,951 European ancestry smokers
Replication sampleNA
Region3p25.1
Chromosome idchr3
Chromosome position13816472
Reported geneWNT7A
Mapped geneLINC00620 - WNT7A
Upstream gene id285375
Downstream gene id7476
SNP gene ids
Upstream gene distance69837
Downstream gene distance1745
SNP risk allelers1124480-C
SNPsrs1124480
Merged0
SNP id current1124480
Context3_prime_UTR_variant
Intergenic1
Allele frequency0.46
P value0.000009
Pvalue mlog5.04575749056067
P value text(IL6)
Or beta
%95 Ci
PlatformIllumina [588352]
CNVN
Mapped traitinterleukin-6 measurement, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004810, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST001737