Human SNP ID | rs11241261 |
---|---|
Human chromosome | chr5 |
Human SNP position | 114059784 |
Pig chromosome | chr2 |
Pig SNP position | 123012826 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Hippocampal sclerosis |
Initial sample | 310 cases, 2,576 controls |
Replication sample | NA |
Region | 5q22.3 |
Chromosome id | chr5 |
Chromosome position | 114059784 |
Reported gene | intergenic |
Mapped gene | KCNN2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3781 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11241261-T |
SNPs | rs11241261 |
Merged | 0 |
SNP id current | 11241261 |
Context | downstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.1491 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.5443 |
%95 Ci | [0.32-0.77] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | hippocampal sclerosis of aging |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005678 |
Study accession | GCST002589 |