SNP Detail For rs11241261
1.Mapping Information
Human SNP ID rs11241261
Human chromosome chr5
Human SNP position 114059784
Pig chromosome chr2
Pig SNP position 123012826
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitHippocampal sclerosis
Initial sample310 cases, 2,576 controls
Replication sampleNA
Region5q22.3
Chromosome idchr5
Chromosome position114059784
Reported geneintergenic
Mapped geneKCNN2
Upstream gene id
Downstream gene id
SNP gene ids3781
Upstream gene distance
Downstream gene distance
SNP risk allelers11241261-T
SNPsrs11241261
Merged0
SNP id current11241261
Contextdownstream_gene_variant
Intergenic0
Allele frequency0.1491
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.5443
%95 Ci[0.32-0.77] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traithippocampal sclerosis of aging
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005678
Study accessionGCST002589