Human SNP ID | rs11241130 |
---|---|
Human chromosome | chr5 |
Human SNP position | 111623085 |
Pig chromosome | chr2 |
Pig SNP position | 122475807 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 5q22.1 |
Chromosome id | chr5 |
Chromosome position | 111623085 |
Reported gene | NREP |
Mapped gene | STARD4-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100505678 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11241130-G |
SNPs | rs11241130 |
Merged | 0 |
SNP id current | 11241130 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.129 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (Sleep duration ) |
Or beta | 0.04 |
%95 Ci | [NR] min/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | sleep measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004870 |
Study accession | GCST001762 |