Human SNP ID | rs11240074 |
---|---|
Human chromosome | chr1 |
Human SNP position | 147524657 |
Pig chromosome | chr4 |
Pig SNP position | 109903520 |
PubMed ID | 25760438 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25760438 |
Study | First genome-wide association study in an Australian aboriginal population provides insights into genetic risk factors for body mass index and type 2 diabetes. |
Disease/Trait | Type 2 diabetes |
Initial sample | 89 Martu Australian Aboriginal ancestry cases, 302 Martu Australian Aboriginal ancestry controls |
Replication sample | NA |
Region | 1q21.2 |
Chromosome id | chr1 |
Chromosome position | 147524657 |
Reported gene | BCL9, CHD1L |
Mapped gene | LINC00624 - BCL9 |
Upstream gene id | 100289211 |
Downstream gene id | 607 |
SNP gene ids | |
Upstream gene distance | 6782 |
Downstream gene distance | 16744 |
SNP risk allele | rs11240074-? |
SNPs | rs11240074 |
Merged | 0 |
SNP id current | 11240074 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.21 |
%95 Ci | [0.11-0.31] unit increase |
Platform | Illumina [1075436] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST002806 |