SNP Detail For rs11232535
1.Mapping Information
Human SNP ID rs11232535
Human chromosome chr11
Human SNP position 81217766
Pig chromosome chr9
Pig SNP position 17208443
2.Annotation Information
PubMed ID23720494
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23720494
StudyGenome-wide association study identifies loci affecting blood copper, selenium and zinc.
Disease/TraitBlood trace element (Zn levels)
Initial sample2,603 European ancestry individuals
Replication sampleNA
Region11q14.1
Chromosome idchr11
Chromosome position81217766
Reported geneintergenic
Mapped geneLOC101928964
Upstream gene id
Downstream gene id
SNP gene ids101928964
Upstream gene distance
Downstream gene distance
SNP risk allelers11232535-?
SNPsrs11232535
Merged0
SNP id current11232535
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta0.325
%95 Ci[0.20-0.45] unit increase
PlatformIllumina [> 2500000] (imputed)
CNVN
Mapped traitserum zinc measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005268
Study accessionGCST002040