Human SNP ID | rs11232535 |
---|---|
Human chromosome | chr11 |
Human SNP position | 81217766 |
Pig chromosome | chr9 |
Pig SNP position | 17208443 |
PubMed ID | 23720494 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23720494 |
Study | Genome-wide association study identifies loci affecting blood copper, selenium and zinc. |
Disease/Trait | Blood trace element (Zn levels) |
Initial sample | 2,603 European ancestry individuals |
Replication sample | NA |
Region | 11q14.1 |
Chromosome id | chr11 |
Chromosome position | 81217766 |
Reported gene | intergenic |
Mapped gene | LOC101928964 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928964 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11232535-? |
SNPs | rs11232535 |
Merged | 0 |
SNP id current | 11232535 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 0.325 |
%95 Ci | [0.20-0.45] unit increase |
Platform | Illumina [> 2500000] (imputed) |
CNV | N |
Mapped trait | serum zinc measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005268 |
Study accession | GCST002040 |