SNP Detail For rs11230201
1.Mapping Information
Human SNP ID rs11230201
Human chromosome chr11
Human SNP position 60229521
Pig chromosome chr2
Pig SNP position 10915721
2.Annotation Information
PubMed ID26561523
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26561523
StudyA meta-analysis of 120,246 individuals identifies 18 new loci for fibrinogen concentration.
Disease/TraitFibrinogen levels
Initial sample120,246 European ancestry individuals
Replication sampleNA
Region11q12.2
Chromosome idchr11
Chromosome position60229521
Reported geneMS4A6A
Mapped geneMS4A4E
Upstream gene id
Downstream gene id
SNP gene ids643680
Upstream gene distance
Downstream gene distance
SNP risk allelers11230201-G
SNPsrs11230201
Merged0
SNP id current11230201
Contextintron_variant
Intergenic0
Allele frequency0.41
P value0.0000000005
Pvalue mlog9.30102999566398
P value text
Or beta0.0057
%95 CiNR unit decrease
PlatformAffymetrix, Illumina [~ 10700000] (imputed)
CNVN
Mapped traitfibrinogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004623
Study accessionGCST003194