SNP Detail For rs11216435
1.Mapping Information
Human SNP ID rs11216435
Human chromosome chr11
Human SNP position 117518217
Pig chromosome chr9
Pig SNP position 49948592
2.Annotation Information
PubMed ID23599027
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23599027
StudyGenome-wide association study of age at menarche in African-American women.
Disease/TraitMenarche (age at onset)
Initial sample18,089 African American individuals
Replication sample2,850 African American individuals, 87,802 European ancestry inidividuals
Region11q23.3
Chromosome idchr11
Chromosome position117518217
Reported geneDSCAML1
Mapped geneDSCAML1
Upstream gene id
Downstream gene id
SNP gene ids57453
Upstream gene distance
Downstream gene distance
SNP risk allelers11216435-T
SNPsrs11216435
Merged0
SNP id current11216435
Contextintron_variant
Intergenic0
Allele frequency0.32
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta4.41
%95 Ci[2.55-6.27] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST001973