SNP Detail For rs11215400
1.Mapping Information
Human SNP ID rs11215400
Human chromosome chr11
Human SNP position 115181915
Pig chromosome chr9
Pig SNP position 47763886
2.Annotation Information
PubMed ID25231870
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25231870
StudyParent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
Disease/TraitMenarche (age at onset)
Initial sampleUp to 182,413 European ancestry females
Replication sampleNA
Region11q23.3
Chromosome idchr11
Chromosome position115181915
Reported geneCADM1
Mapped geneCADM1
Upstream gene id
Downstream gene id
SNP gene ids23705
Upstream gene distance
Downstream gene distance
SNP risk allelers11215400-C
SNPsrs11215400
Merged0
SNP id current11215400
Contextintron_variant
Intergenic0
Allele frequency0.27
P value0.00000000007
Pvalue mlog10.1549019599857
P value text
Or beta0.04
%95 Ci[0.028-0.052] unit increase
PlatformAffymetrix, Illumina [2441815] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST002541