Human SNP ID | rs1120787 |
---|---|
Human chromosome | chr18 |
Human SNP position | 57316323 |
Pig chromosome | chr5 |
Pig SNP position | 79452446 |
PubMed ID | 20041166 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20041166 |
Study | Common genetic variation and the control of HIV-1 in humans. |
Disease/Trait | HIV-1 control |
Initial sample | 2,362 European ancestry cases |
Replication sample | NA |
Region | 18q21.31 |
Chromosome id | chr18 |
Chromosome position | 57316323 |
Reported gene | intergenic |
Mapped gene | LOC105372138 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105372138 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1120787-? |
SNPs | rs1120787 |
Merged | 0 |
SNP id current | 1120787 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (progression) |
Or beta | |
%95 Ci | |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | HIV-1 infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000180 |
Study accession | GCST000549 |