SNP Detail For rs11206830
1.Mapping Information
Human SNP ID rs11206830
Human chromosome chr1
Human SNP position 56494451
Pig chromosome chr6
Pig SNP position 143734331
2.Annotation Information
PubMed ID25017104
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25017104
StudyGenome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease.
Disease/TraitEosinophilic esophagitis
Initial sample657 European ancestry cases, 9,296 European ancestry controls
Replication sampleNA
Region1p32.2
Chromosome idchr1
Chromosome position56494451
Reported geneNR
Mapped geneLOC101929929 - PPAP2B
Upstream gene id101929929
Downstream gene id8613
SNP gene ids
Upstream gene distance11003
Downstream gene distance296
SNP risk allelers11206830-?
SNPsrs11206830
Merged0
SNP id current11206830
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.02
P value0.00000008
Pvalue mlog7.09691001300805
P value text
Or beta2.162
%95 Ci[NR]
PlatformIllumina [1468075]
CNVN
Mapped traiteosinophilic esophagitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004232
Study accessionGCST002527