Human SNP ID | rs11206801 |
---|---|
Human chromosome | chr1 |
Human SNP position | 56385014 |
Pig chromosome | chr6 |
Pig SNP position | 143824602 |
PubMed ID | 20932310 |
---|---|
Journal | BMC Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/20932310 |
Study | Genome-wide association reveals genetic effects on human Aβ42 and τ protein levels in cerebrospinal fluids: a case control study. |
Disease/Trait | Cerebrospinal AB1-42 levels |
Initial sample | 172 European ancestry Alzheimer__s disease cases, 109 European ancestry mild cognitive impairment cases, 109 European ancestry controls |
Replication sample | NA |
Region | 1p32.2 |
Chromosome id | chr1 |
Chromosome position | 56385014 |
Reported gene | intergenic |
Mapped gene | LOC105378743 - LOC105378744 |
Upstream gene id | 105378743 |
Downstream gene id | 105378744 |
SNP gene ids | |
Upstream gene distance | 157683 |
Downstream gene distance | 29565 |
SNP risk allele | rs11206801-A |
SNPs | rs11206801 |
Merged | 0 |
SNP id current | 11206801 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000006 |
Pvalue mlog | 7.22184874961635 |
P value text | (Controls) |
Or beta | |
%95 Ci | |
Platform | Illumina [498205] |
CNV | N |
Mapped trait | beta-amyloid 1-42 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004670 |
Study accession | GCST000827 |