Human SNP ID | rs11206226 |
---|---|
Human chromosome | chr1 |
Human SNP position | 53854664 |
Pig chromosome | chr6 |
Pig SNP position | 146144056 |
PubMed ID | 22719876 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22719876 |
Study | Genetic polymorphisms of the human PNPLA3 gene are strongly associated with severity of non-alcoholic fatty liver disease in Japanese. |
Disease/Trait | Nonalcoholic fatty liver disease |
Initial sample | 529 Japanese ancestry cases, 932 Japanese ancestry controls |
Replication sample | NA |
Region | 1p32.3 |
Chromosome id | chr1 |
Chromosome position | 53854664 |
Reported gene | YIPF1 |
Mapped gene | YIPF1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54432 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11206226-A |
SNPs | rs11206226 |
Merged | 0 |
SNP id current | 11206226 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.848 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.72 |
%95 Ci | [1.35-2.22] |
Platform | Illumina [484751] |
CNV | N |
Mapped trait | non-alcoholic fatty liver disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003095 |
Study accession | GCST001576 |