SNP Detail For rs11200392
1.Mapping Information
Human SNP ID rs11200392
Human chromosome chr10
Human SNP position 122092312
Pig chromosome chr14
Pig SNP position 142982040
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region10q26.13
Chromosome idchr10
Chromosome position122092312
Reported geneTACC2
Mapped geneTACC2
Upstream gene id
Downstream gene id
SNP gene ids10579
Upstream gene distance
Downstream gene distance
SNP risk allelers11200392-A
SNPsrs11200392
Merged0
SNP id current11200392
Contextintron_variant
Intergenic0
Allele frequency0.368
P value0.000003
Pvalue mlog5.52287874528033
P value text(Height change )
Or beta0.04
%95 Ci[NR] cm/y increase
PlatformIllumina [899892]
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001762