SNP Detail For rs11198013
1.Mapping Information
Human SNP ID rs11198013
Human chromosome chr10
Human SNP position 117494227
Pig chromosome chr14
Pig SNP position 138994742
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitQT interval in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region10q26.11
Chromosome idchr10
Chromosome position117494227
Reported geneNR
Mapped geneEMX2OS
Upstream gene id
Downstream gene id
SNP gene ids196047
Upstream gene distance
Downstream gene distance
SNP risk allelers11198013-?
SNPsrs11198013
Merged0
SNP id current11198013
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitQT interval, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002278