SNP Detail For rs11193561
1.Mapping Information
Human SNP ID rs11193561
Human chromosome chr10
Human SNP position 107614626
Pig chromosome chr14
Pig SNP position 128911862
2.Annotation Information
PubMed ID23472165
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23472165
StudyGenome-wide association study link novel loci to endometriosis.
Disease/TraitEndometriosis
Initial sample1,514 European ancestry casses, 12,660 European ancestry controls
Replication sample505 European ancestry cases, 1,811 European ancestry controls
Region10q25.1
Chromosome idchr10
Chromosome position107614626
Reported geneSORCS1, LOC100128304
Mapped geneLOC105378474 - LOC101927573
Upstream gene id105378474
Downstream gene id101927573
SNP gene ids
Upstream gene distance209790
Downstream gene distance74943
SNP risk allelers11193561-A
SNPsrs11193561
Merged0
SNP id current11193561
Contextintergenic_variant
Intergenic1
Allele frequency0.239
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.19
%95 Ci[NR]
PlatformIllumina [580699]
CNVN
Mapped traitendometriosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001065
Study accessionGCST001894