Human SNP ID | rs11190134 |
---|---|
Human chromosome | chr10 |
Human SNP position | 99522443 |
Pig chromosome | chr14 |
Pig SNP position | 120155779 |
PubMed ID | 23222517 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23222517 |
Study | Seventy-five genetic loci influencing the human red blood cell. |
Disease/Trait | Red blood cell traits |
Initial sample | 62,553 European ancestry individuals, 9,308 South Asian ancestry individuals |
Replication sample | 63,506 European ancestry individuals |
Region | 10q24.2 |
Chromosome id | chr10 |
Chromosome position | 99522443 |
Reported gene | NKX2-3 |
Mapped gene | LOC101927300 - LINC01475 |
Upstream gene id | 101927300 |
Downstream gene id | 101927324 |
SNP gene ids | |
Upstream gene distance | 61227 |
Downstream gene distance | 3907 |
SNP risk allele | rs11190134-G |
SNPs | rs11190134 |
Merged | 0 |
SNP id current | 11190134 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.6 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | (EA, MCH) |
Or beta | 0.011 |
%95 Ci | [0.0032-0.0188] unit decrease |
Platform | Affymetrix, Illumina, Perlegen [2711806] (imputed) |
CNV | N |
Mapped trait | mean corpuscular hemoglobin |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004527 |
Study accession | GCST001765 |