SNP Detail For rs11190134
1.Mapping Information
Human SNP ID rs11190134
Human chromosome chr10
Human SNP position 99522443
Pig chromosome chr14
Pig SNP position 120155779
2.Annotation Information
PubMed ID23222517
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/23222517
StudySeventy-five genetic loci influencing the human red blood cell.
Disease/TraitRed blood cell traits
Initial sample62,553 European ancestry individuals, 9,308 South Asian ancestry individuals
Replication sample63,506 European ancestry individuals
Region10q24.2
Chromosome idchr10
Chromosome position99522443
Reported geneNKX2-3
Mapped geneLOC101927300 - LINC01475
Upstream gene id101927300
Downstream gene id101927324
SNP gene ids
Upstream gene distance61227
Downstream gene distance3907
SNP risk allelers11190134-G
SNPsrs11190134
Merged0
SNP id current11190134
Contextupstream_gene_variant
Intergenic1
Allele frequency0.6
P value0.0000000001
Pvalue mlog10
P value text(EA, MCH)
Or beta0.011
%95 Ci[0.0032-0.0188] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2711806] (imputed)
CNVN
Mapped traitmean corpuscular hemoglobin
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004527
Study accessionGCST001765