Human SNP ID | rs11177669 |
---|---|
Human chromosome | chr12 |
Human SNP position | 69434901 |
Pig chromosome | chr5 |
Pig SNP position | 36290168 |
PubMed ID | 18391951 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18391951 |
Study | Many sequence variants affecting diversity of adult human height. |
Disease/Trait | Height |
Initial sample | 30,968 European ancestry individuals |
Replication sample | 8,541 European ancestry individuals |
Region | 12q15 |
Chromosome id | chr12 |
Chromosome position | 69434901 |
Reported gene | FRS2, LYZ, YEATS4, CPSF6, CCT2, LRRC10 |
Mapped gene | LOC105369822 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105369822 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11177669-A |
SNPs | rs11177669 |
Merged | 0 |
SNP id current | 11177669 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.31 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 4.5 |
%95 Ci | [2.54-6.46] % s.d. increase |
Platform | Affymetrix, Illumina [up to 304226] |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000175 |