SNP Detail For rs11177669
1.Mapping Information
Human SNP ID rs11177669
Human chromosome chr12
Human SNP position 69434901
Pig chromosome chr5
Pig SNP position 36290168
2.Annotation Information
PubMed ID18391951
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/18391951
StudyMany sequence variants affecting diversity of adult human height.
Disease/TraitHeight
Initial sample30,968 European ancestry individuals
Replication sample8,541 European ancestry individuals
Region12q15
Chromosome idchr12
Chromosome position69434901
Reported geneFRS2, LYZ, YEATS4, CPSF6, CCT2, LRRC10
Mapped geneLOC105369822
Upstream gene id
Downstream gene id
SNP gene ids105369822
Upstream gene distance
Downstream gene distance
SNP risk allelers11177669-A
SNPsrs11177669
Merged0
SNP id current11177669
Contextintergenic_variant
Intergenic0
Allele frequency0.31
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta4.5
%95 Ci[2.54-6.46] % s.d. increase
PlatformAffymetrix, Illumina [up to 304226]
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000175