Human SNP ID | rs11166135 |
---|---|
Human chromosome | chr1 |
Human SNP position | 98883280 |
Pig chromosome | chr4 |
Pig SNP position | 130677180 |
PubMed ID | 23064961 |
---|---|
Journal | J Dent Res |
Link | www.ncbi.nlm.nih.gov/pubmed/23064961 |
Study | GWAS of dental caries patterns in the permanent dentition. |
Disease/Trait | Dental caries |
Initial sample | 920 European ancestry individuals |
Replication sample | NA |
Region | 1p21.3 |
Chromosome id | chr1 |
Chromosome position | 98883280 |
Reported gene | LPPR5 |
Mapped gene | SNX7 - LPPR5 |
Upstream gene id | 51375 |
Downstream gene id | 163404 |
SNP gene ids | |
Upstream gene distance | 122780 |
Downstream gene distance | 6965 |
SNP risk allele | rs11166135-? |
SNPs | rs11166135 |
Merged | 0 |
SNP id current | 11166135 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (DMFS3) |
Or beta | |
%95 Ci | |
Platform | Illumina [518997] |
CNV | N |
Mapped trait | dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003819 |
Study accession | GCST001713 |