SNP Detail For rs11166135
1.Mapping Information
Human SNP ID rs11166135
Human chromosome chr1
Human SNP position 98883280
Pig chromosome chr4
Pig SNP position 130677180
2.Annotation Information
PubMed ID23064961
JournalJ Dent Res
Linkwww.ncbi.nlm.nih.gov/pubmed/23064961
StudyGWAS of dental caries patterns in the permanent dentition.
Disease/TraitDental caries
Initial sample920 European ancestry individuals
Replication sampleNA
Region1p21.3
Chromosome idchr1
Chromosome position98883280
Reported geneLPPR5
Mapped geneSNX7 - LPPR5
Upstream gene id51375
Downstream gene id163404
SNP gene ids
Upstream gene distance122780
Downstream gene distance6965
SNP risk allelers11166135-?
SNPsrs11166135
Merged0
SNP id current11166135
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(DMFS3)
Or beta
%95 Ci
PlatformIllumina [518997]
CNVN
Mapped traitdental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003819
Study accessionGCST001713