SNP Detail For rs11161851
1.Mapping Information
Human SNP ID rs11161851
Human chromosome chr1
Human SNP position 74833098
Pig chromosome chr6
Pig SNP position 128228525
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral fat
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region1p31.1
Chromosome idchr1
Chromosome position74833098
Reported geneTYW3
Mapped geneTYW3 - LHX8
Upstream gene id127253
Downstream gene id431707
SNP gene ids
Upstream gene distance66421
Downstream gene distance295336
SNP risk allelers11161851-T
SNPsrs11161851
Merged0
SNP id current11161851
Contextintergenic_variant
Intergenic1
Allele frequency0.57
P value0.000007
Pvalue mlog5.15490195998574
P value text(overall)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765
Study accessionGCST001525