SNP Detail For rs11158559
1.Mapping Information
Human SNP ID rs11158559
Human chromosome chr14
Human SNP position 64774231
Pig chromosome chr7
Pig SNP position 95217106
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region14q23.3
Chromosome idchr14
Chromosome position64774231
Reported geneSPTB
Mapped geneSPTB
Upstream gene id
Downstream gene id
SNP gene ids6710
Upstream gene distance
Downstream gene distance
SNP risk allelers11158559-A
SNPsrs11158559
Merged0
SNP id current11158559
Contextintron_variant
Intergenic0
Allele frequency0.148
P value0.000001
Pvalue mlog6
P value text(Leptin )
Or beta0.03
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitleptin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005000
Study accessionGCST001762
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region14q23.3
Chromosome idchr14
Chromosome position64774231
Reported geneSPTB
Mapped geneSPTB
Upstream gene id
Downstream gene id
SNP gene ids6710
Upstream gene distance
Downstream gene distance
SNP risk allelers11158559-A
SNPsrs11158559
Merged0
SNP id current11158559
Contextintron_variant
Intergenic0
Allele frequency0.148
P value0.000006
Pvalue mlog5.22184874961635
P value text(INS )
Or beta0.03
%95 Ci[NR] 碌U/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitfasting blood insulin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004466
Study accessionGCST001762