Human SNP ID | rs11157317 |
---|---|
Human chromosome | chr14 |
Human SNP position | 42934256 |
Pig chromosome | chr1 |
Pig SNP position | 192916571 |
PubMed ID | 23502783 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23502783 |
Study | The CCND1 c.870G>A polymorphism is a risk factor for t(11;14)(q13;q32) multiple myeloma. |
Disease/Trait | Multiple myeloma (hyperdiploidy) |
Initial sample | up to 1,660 European ancestry cases, 7,306 European ancestry controls |
Replication sample | |
Region | 14q21.1 |
Chromosome id | chr14 |
Chromosome position | 42934256 |
Reported gene | NR |
Mapped gene | LRFN5 - LOC105370470 |
Upstream gene id | 145581 |
Downstream gene id | 105370470 |
SNP gene ids | |
Upstream gene distance | 1029707 |
Downstream gene distance | 374425 |
SNP risk allele | rs11157317-A |
SNPs | rs11157317 |
Merged | 0 |
SNP id current | 11157317 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.25 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (HD vs. controls) |
Or beta | 1.29 |
%95 Ci | [1.15-1.44] |
Platform | Illumina [414804] |
CNV | N |
Mapped trait | multiple myeloma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001378 |
Study accession | GCST001907 |