SNP Detail For rs11157317
1.Mapping Information
Human SNP ID rs11157317
Human chromosome chr14
Human SNP position 42934256
Pig chromosome chr1
Pig SNP position 192916571
2.Annotation Information
PubMed ID23502783
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23502783
StudyThe CCND1 c.870G>A polymorphism is a risk factor for t(11;14)(q13;q32) multiple myeloma.
Disease/TraitMultiple myeloma (hyperdiploidy)
Initial sampleup to 1,660 European ancestry cases, 7,306 European ancestry controls
Replication sample
Region14q21.1
Chromosome idchr14
Chromosome position42934256
Reported geneNR
Mapped geneLRFN5 - LOC105370470
Upstream gene id145581
Downstream gene id105370470
SNP gene ids
Upstream gene distance1029707
Downstream gene distance374425
SNP risk allelers11157317-A
SNPsrs11157317
Merged0
SNP id current11157317
Contextintergenic_variant
Intergenic1
Allele frequency0.25
P value0.000009
Pvalue mlog5.04575749056067
P value text(HD vs. controls)
Or beta1.29
%95 Ci[1.15-1.44]
PlatformIllumina [414804]
CNVN
Mapped traitmultiple myeloma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001378
Study accessionGCST001907