Human SNP ID | rs11129640 |
---|---|
Human chromosome | chr3 |
Human SNP position | 35101019 |
Pig chromosome | chr13 |
Pig SNP position | 22420160 |
PubMed ID | 21116278 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/21116278 |
Study | Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer__s disease. |
Disease/Trait | Entorhinal cortical thickness |
Initial sample | 424 European ancestry mild cognitive impairment cases, 236 European ancestry Alzheimer__s disease cases, 279 European ancestry controls |
Replication sample | NA |
Region | 3p22.3 |
Chromosome id | chr3 |
Chromosome position | 35101019 |
Reported gene | ARPP-21 |
Mapped gene | LOC101928135 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928135 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11129640-? |
SNPs | rs11129640 |
Merged | 0 |
SNP id current | 11129640 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000006 |
Pvalue mlog | 7.22184874961635 |
P value text | |
Or beta | 0.123 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [478011] |
CNV | N |
Mapped trait | cortical thickness |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004840 |
Study accession | GCST000894 |