Human SNP ID | rs11127662 |
---|---|
Human chromosome | chr3 |
Human SNP position | 79722837 |
Pig chromosome | chr13 |
Pig SNP position | 185942783 |
PubMed ID | 26569114 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26569114 |
Study | Genome-Wide Association Study of Staphylococcus aureus Carriage in a Community-Based Sample of Mexican-Americans in Starr County, Texas. |
Disease/Trait | Staphylococcus aureus nasal carriage (intermittent) |
Initial sample | 97 Mexican American intermittent carrier individuals, 620 Mexican American non-carrier individuals |
Replication sample | NA |
Region | 3p12.3 |
Chromosome id | chr3 |
Chromosome position | 79722837 |
Reported gene | ROBO1 |
Mapped gene | ROBO1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6091 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11127662-G |
SNPs | rs11127662 |
Merged | |
SNP id current | 11127662 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.06 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 4.32 |
%95 Ci | [2.37鈥?.87] |
Platform | Affymetrix, Illumina [at least 603042] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003181 |