SNP Detail For rs11127662
1.Mapping Information
Human SNP ID rs11127662
Human chromosome chr3
Human SNP position 79722837
Pig chromosome chr13
Pig SNP position 185942783
2.Annotation Information
PubMed ID26569114
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26569114
StudyGenome-Wide Association Study of Staphylococcus aureus Carriage in a Community-Based Sample of Mexican-Americans in Starr County, Texas.
Disease/TraitStaphylococcus aureus nasal carriage (intermittent)
Initial sample97 Mexican American intermittent carrier individuals, 620 Mexican American non-carrier individuals
Replication sampleNA
Region3p12.3
Chromosome idchr3
Chromosome position79722837
Reported geneROBO1
Mapped geneROBO1
Upstream gene id
Downstream gene id
SNP gene ids6091
Upstream gene distance
Downstream gene distance
SNP risk allelers11127662-G
SNPsrs11127662
Merged
SNP id current11127662
Contextintron_variant
Intergenic0
Allele frequency0.06
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta4.32
%95 Ci[2.37鈥?.87]
PlatformAffymetrix, Illumina [at least 603042] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003181