SNP Detail For rs11126185
1.Mapping Information
Human SNP ID rs11126185
Human chromosome chr2
Human SNP position 68425448
Pig chromosome chr3
Pig SNP position 77399046
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region2p13.3
Chromosome idchr2
Chromosome position68425448
Reported geneLOC391383
Mapped genePLEK - LOC391383
Upstream gene id5341
Downstream gene id391383
SNP gene ids
Upstream gene distance27995
Downstream gene distance22443
SNP risk allelers11126185-G
SNPsrs11126185
Merged0
SNP id current11126185
Contextregulatory_region_variant
Intergenic1
Allele frequency0.188
P value0.000005
Pvalue mlog5.30102999566398
P value text(ALT/AST)
Or beta0.03
%95 Ci[NR] unit increase
PlatformIllumina [899892]
CNVN
Mapped traitaspartate aminotransferase measurement, serum alanine aminotransferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004736, http://www.ebi.ac.uk/efo/EFO_0004735
Study accessionGCST001762