Human SNP ID | rs11126185 |
---|---|
Human chromosome | chr2 |
Human SNP position | 68425448 |
Pig chromosome | chr3 |
Pig SNP position | 77399046 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 2p13.3 |
Chromosome id | chr2 |
Chromosome position | 68425448 |
Reported gene | LOC391383 |
Mapped gene | PLEK - LOC391383 |
Upstream gene id | 5341 |
Downstream gene id | 391383 |
SNP gene ids | |
Upstream gene distance | 27995 |
Downstream gene distance | 22443 |
SNP risk allele | rs11126185-G |
SNPs | rs11126185 |
Merged | 0 |
SNP id current | 11126185 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.188 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (ALT/AST) |
Or beta | 0.03 |
%95 Ci | [NR] unit increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | aspartate aminotransferase measurement, serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004736, http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST001762 |