SNP Detail For rs11122895
1.Mapping Information
Human SNP ID rs11122895
Human chromosome chr2
Human SNP position 111712578
Pig chromosome chr3
Pig SNP position 46442596
2.Annotation Information
PubMed ID23817571
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23817571
StudyMeta-analysis of genome-wide association studies identifies ten loci influencing allergic sensitization.
Disease/TraitAllergic sensitization
Initial sample5,789 European ancestry cases, 10,056 European ancestry controls
Replication sample6,114 European ancestry cases, 9,920 European ancestry controls
Region2q13
Chromosome idchr2
Chromosome position111712578
Reported geneANAPC1
Mapped geneLOC105373987
Upstream gene id
Downstream gene id
SNP gene ids105373987
Upstream gene distance
Downstream gene distance
SNP risk allelers11122895-T
SNPsrs11122895
Merged0
SNP id current11122895
Contextupstream_gene_variant
Intergenic0
Allele frequency0.39
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.09
%95 Ci[1.05-1.13]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitallergic sensitization measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005298
Study accessionGCST002084