SNP Detail For rs11122834
1.Mapping Information
Human SNP ID rs11122834
Human chromosome chr2
Human SNP position 120943713
Pig chromosome chr15
Pig SNP position 35365339
2.Annotation Information
PubMed ID20932654
JournalInt J Radiat Oncol Biol Phys
Linkwww.ncbi.nlm.nih.gov/pubmed/20932654
StudyGenome-wide association study to identify single nucleotide polymorphisms (SNPs) associated with the development of erectile dysfunction in African-American men after radiotherapy for prostate cancer.
Disease/TraitErectile dysfunction and prostate cancer treatment
Initial sample27 African American cases, 52 African American controls
Replication sampleNA
Region2q14.2
Chromosome idchr2
Chromosome position120943713
Reported geneGLI2
Mapped geneGLI2
Upstream gene id
Downstream gene id
SNP gene ids2736
Upstream gene distance
Downstream gene distance
SNP risk allelers11122834-?
SNPsrs11122834
Merged0
SNP id current11122834
Contextintron_variant
Intergenic0
Allele frequency0.29
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta4.93
%95 Ci[NR]
PlatformAffymetrix [512497]
CNVN
Mapped traitresponse to radiation, prostate carcinoma, erectile dysfunction
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0009314, http://www.ebi.ac.uk/efo/EFO_0001663, http://www.ebi.ac.uk/efo/EFO_0004234
Study accessionGCST000824