SNP Detail For rs11120822
1.Mapping Information
Human SNP ID rs11120822
Human chromosome chr1
Human SNP position 7053052
Pig chromosome chr6
Pig SNP position 62567574
2.Annotation Information
PubMed ID23362303
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23362303
StudyGenome-wide association study identifies novel loci associated with concentrations of four plasma phospholipid fatty acids in the de novo lipogenesis pathway: results from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortiu
Disease/TraitStearic acid (18:0) plasma levels
Initial sample8,961 European ancestry individuals
Replication sample
Region1p36.31
Chromosome idchr1
Chromosome position7053052
Reported geneCAMTA1
Mapped geneCAMTA1
Upstream gene id
Downstream gene id
SNP gene ids23261
Upstream gene distance
Downstream gene distance
SNP risk allelers11120822-C
SNPsrs11120822
Merged0
SNP id current11120822
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta0.0931
%95 Ciunit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitphospholipid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004639
Study accessionGCST001840