SNP Detail For rs11118555
1.Mapping Information
Human SNP ID rs11118555
Human chromosome chr1
Human SNP position 207767508
Pig chromosome chr9
Pig SNP position 74657417
2.Annotation Information
PubMed ID23583979
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583979
StudyIdentification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.
Disease/TraitHeart rate
Initial sample85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals
Replication sample88,823 European ancestry individuals
Region1q32.2
Chromosome idchr1
Chromosome position207767508
Reported geneCD46
Mapped geneC1orf132, CD46
Upstream gene id
Downstream gene id
SNP gene ids100128537, 4179
Upstream gene distance
Downstream gene distance
SNP risk allelers11118555-A
SNPsrs11118555
Merged0
SNP id current11118555
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.124
P value4E-26
Pvalue mlog25.397940008672
P value text
Or beta0.612
%95 Ci[0.48-0.75] unit increase
PlatformAffymetrix, Illumina [2516789] (imputed)
CNVN
Mapped traitheart rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004326
Study accessionGCST001969