SNP Detail For rs11101442
1.Mapping Information
Human SNP ID rs11101442
Human chromosome chr10
Human SNP position 48728291
Pig chromosome chr14
Pig SNP position 97186724
2.Annotation Information
PubMed ID19165918
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19165918
StudyGenetic variants near TNFAIP3 on 6q23 are associated with systemic lupus erythematosus.
Disease/TraitSystemic lupus erythematosus
Initial sample431 European ancestry cases, 2,155 European ancestry controls
Replication sample447 European ancestry trios, 293 trios
Region10q11.23
Chromosome idchr10
Chromosome position48728291
Reported genec10orf64
Mapped geneWDFY4
Upstream gene id
Downstream gene id
SNP gene ids57705
Upstream gene distance
Downstream gene distance
SNP risk allelers11101442-?
SNPsrs11101442
Merged0
SNP id current11101442
Contextintron_variant
Intergenic0
Allele frequency0.32
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci[NR]
PlatformAffymetrix [313238]
CNVN
Mapped traitsystemic lupus erythematosus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690
Study accessionGCST000216