SNP Detail For rs1108842
1.Mapping Information
Human SNP ID rs1108842
Human chromosome chr3
Human SNP position 52686064
Pig chromosome chr13
Pig SNP position 38020691
2.Annotation Information
PubMed ID22479202
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22479202
StudyNovel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals.
Disease/TraitAdiponectin levels
Initial sample29,347 European ancestry individuals
Replication sample10,536 European ancestry individuals
Region3p21.1
Chromosome idchr3
Chromosome position52686064
Reported geneGNL3
Mapped geneGNL3
Upstream gene id
Downstream gene id
SNP gene ids26354
Upstream gene distance
Downstream gene distance
SNP risk allelers1108842-C
SNPsrs1108842
Merged0
SNP id current1108842
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.5
P value0.0000000000001
Pvalue mlog13
P value text
Or beta0.03
%95 Ci[0.022-0.038] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitadiponectin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004502
Study accessionGCST001465