SNP Detail For rs11079830
1.Mapping Information
Human SNP ID rs11079830
Human chromosome chr17
Human SNP position 48605268
Pig chromosome chr12
Pig SNP position 24864031
2.Annotation Information
PubMed ID26604143
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26604143
StudyGenome-wide association analysis identifies three new susceptibility loci for childhood body mass index.
Disease/TraitChildhood body mass index
Initial sample34,744 European ancestry children
Replication sample11,313 European ancestry children
Region17q21.32
Chromosome idchr17
Chromosome position48605268
Reported geneHOXB6
Mapped geneHOXB-AS3
Upstream gene id
Downstream gene id
SNP gene ids404266
Upstream gene distance
Downstream gene distance
SNP risk allelers11079830-A
SNPsrs11079830
Merged0
SNP id current11079830
Contextintron_variant
Intergenic0
Allele frequency0.58
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.034
%95 Ci[0.02-0.048] unit increase
PlatformAffymetrix, Illumina [2499691] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST003177