Human SNP ID | rs11079830 |
---|---|
Human chromosome | chr17 |
Human SNP position | 48605268 |
Pig chromosome | chr12 |
Pig SNP position | 24864031 |
PubMed ID | 26604143 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26604143 |
Study | Genome-wide association analysis identifies three new susceptibility loci for childhood body mass index. |
Disease/Trait | Childhood body mass index |
Initial sample | 34,744 European ancestry children |
Replication sample | 11,313 European ancestry children |
Region | 17q21.32 |
Chromosome id | chr17 |
Chromosome position | 48605268 |
Reported gene | HOXB6 |
Mapped gene | HOXB-AS3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 404266 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11079830-A |
SNPs | rs11079830 |
Merged | 0 |
SNP id current | 11079830 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.58 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.034 |
%95 Ci | [0.02-0.048] unit increase |
Platform | Affymetrix, Illumina [2499691] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST003177 |