Human SNP ID | rs11074779 |
---|---|
Human chromosome | chr16 |
Human SNP position | 26440122 |
Pig chromosome | chr3 |
Pig SNP position | 20505854 |
PubMed ID | 25648963 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25648963 |
Study | Genome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium. |
Disease/Trait | Verbal declarative memory |
Initial sample | Up to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals |
Replication sample | Up to 10,617 European ancestry individuals, up to 3,811 African American individuals |
Region | 16p12.1 |
Chromosome id | chr16 |
Chromosome position | 26440122 |
Reported gene | HS3ST4, C16orf82 |
Mapped gene | LOC102723536 - LOC105371152 |
Upstream gene id | 102723536 |
Downstream gene id | 105371152 |
SNP gene ids | |
Upstream gene distance | 76065 |
Downstream gene distance | 144650 |
SNP risk allele | rs11074779-T |
SNPs | rs11074779 |
Merged | 0 |
SNP id current | 11074779 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.19 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | (RAVLT-dr, EA) |
Or beta | 0.4033 |
%95 Ci | [0.26-0.55] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | word list delayed recall measurement, memory performance |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874 |
Study accession | GCST002701 |
PubMed ID | 25648963 |
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25648963 |
Study | Genome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium. |
Disease/Trait | Verbal declarative memory |
Initial sample | Up to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals |
Replication sample | Up to 10,617 European ancestry individuals, up to 3,811 African American individuals |
Region | 16p12.1 |
Chromosome id | chr16 |
Chromosome position | 26440122 |
Reported gene | HS3ST4, C16orf82 |
Mapped gene | LOC102723536 - LOC105371152 |
Upstream gene id | 102723536 |
Downstream gene id | 105371152 |
SNP gene ids | |
Upstream gene distance | 76065 |
Downstream gene distance | 144650 |
SNP risk allele | rs11074779-T |
SNPs | rs11074779 |
Merged | 0 |
SNP id current | 11074779 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.19 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | (RAVLT-dr) |
Or beta | 0.3757 |
%95 Ci | [0.24-0.52] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | word list delayed recall measurement, memory performance |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874 |
Study accession | GCST002701 |