SNP Detail For rs11072930
1.Mapping Information
Human SNP ID rs11072930
Human chromosome chr15
Human SNP position 80618516
Pig chromosome chr7
Pig SNP position 54984576
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region5q35.1 x 15q25.1
Chromosome idchr5 x 15
Chromosome position171724227 x 80618516
Reported geneNR x NR
Mapped geneLOC105377724 x ARNT2 - ABHD17C
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers10516089-? x rs11072930-?
SNPsrs10516089 x rs11072930
Merged0
SNP id current
Contextintergenic_variant x intergenic_variant
Intergenic
Allele frequency
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta1.5873
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913