Human SNP ID | rs11062102 |
---|---|
Human chromosome | chr12 |
Human SNP position | 239619 |
Pig chromosome | chr5 |
Pig SNP position | 69881981 |
PubMed ID | 26352407 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26352407 |
Study | Genome-Wide Association Study with Targeted and Non-targeted NMR Metabolomics Identifies 15 Novel Loci of Urinary Human Metabolic Individuality. |
Disease/Trait | Urinary metabolites |
Initial sample | 3,861 European ancestry individuals |
Replication sample | 1,691European ancestry individuals |
Region | 12p13.33 |
Chromosome id | chr12 |
Chromosome position | 239619 |
Reported gene | SLC6A13 |
Mapped gene | SLC6A13 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6540 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11062102-T |
SNPs | rs11062102 |
Merged | |
SNP id current | 11062102 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.36 |
P value | 0.00000000000000001 |
Pvalue mlog | 17 |
P value text | (3-aminoisobutyrate) |
Or beta | 0.1755 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix [620456] |
CNV | N |
Mapped trait | urinary metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005116 |
Study accession | GCST003119 |