Human SNP ID | rs11062040 |
---|---|
Human chromosome | chr12 |
Human SNP position | 1982091 |
Pig chromosome | chr5 |
Pig SNP position | 71281604 |
PubMed ID | 22142827 |
---|---|
Journal | Clin Cancer Res |
Link | www.ncbi.nlm.nih.gov/pubmed/22142827 |
Study | A genome-wide association study of overall survival in pancreatic cancer patients treated with gemcitabine in CALGB 80303. |
Disease/Trait | Response to gemcitabine in pancreatic cancer |
Initial sample | 294 European ancestry cases |
Replication sample | NA |
Region | 12p13.33 |
Chromosome id | chr12 |
Chromosome position | 1982091 |
Reported gene | DCP1B |
Mapped gene | DCP1B, CACNA1C |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 196513, 775 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11062040-A |
SNPs | rs11062040 |
Merged | 0 |
SNP id current | 11062040 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.4 |
%95 Ci | [1.20-1.70] |
Platform | Illumina [330690] |
CNV | N |
Mapped trait | response to gemcitabine, pancreatic carcinoma |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036272, http://www.ebi.ac.uk/efo/EFO_0002618 |
Study accession | GCST001346 |