SNP Detail For rs11062040
1.Mapping Information
Human SNP ID rs11062040
Human chromosome chr12
Human SNP position 1982091
Pig chromosome chr5
Pig SNP position 71281604
2.Annotation Information
PubMed ID22142827
JournalClin Cancer Res
Linkwww.ncbi.nlm.nih.gov/pubmed/22142827
StudyA genome-wide association study of overall survival in pancreatic cancer patients treated with gemcitabine in CALGB 80303.
Disease/TraitResponse to gemcitabine in pancreatic cancer
Initial sample294 European ancestry cases
Replication sampleNA
Region12p13.33
Chromosome idchr12
Chromosome position1982091
Reported geneDCP1B
Mapped geneDCP1B, CACNA1C
Upstream gene id
Downstream gene id
SNP gene ids196513, 775
Upstream gene distance
Downstream gene distance
SNP risk allelers11062040-A
SNPsrs11062040
Merged0
SNP id current11062040
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.4
%95 Ci[1.20-1.70]
PlatformIllumina [330690]
CNVN
Mapped traitresponse to gemcitabine, pancreatic carcinoma
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036272, http://www.ebi.ac.uk/efo/EFO_0002618
Study accessionGCST001346