Human SNP ID | rs11055612 |
---|---|
Human chromosome | chr12 |
Human SNP position | 13770394 |
Pig chromosome | chr5 |
Pig SNP position | 62055129 |
PubMed ID | 20197096 |
---|---|
Journal | Neuroimage |
Link | www.ncbi.nlm.nih.gov/pubmed/20197096 |
Study | Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer__s disease. |
Disease/Trait | Brain structure (temporal lobe volume) |
Initial sample | 173 European ancestry Alzheimer__s disease cases, 361 European ancestry Mild Cognitive Impairment cases, 208 European ancestry controls |
Replication sample | NA |
Region | 12p13.1 |
Chromosome id | chr12 |
Chromosome position | 13770394 |
Reported gene | GRIN2B |
Mapped gene | GRIN2B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2904 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11055612-C |
SNPs | rs11055612 |
Merged | 0 |
SNP id current | 11055612 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.5 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 3371.6 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [546314] |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST000614 |